TaxonConcept Ontology
type: Ontology
type: Vocabulary
preferred namespace prefix: txn
preferred namespace uri: http://lod.taxonconcept.org/ontology/txn.owl#
modified: 2013-05-19
version info: 0.976
description: Version 0.976 This is an ontology for dealing with data related to species including observations, specimens, images etc. Traditionally species have been identified by the combination of a genus and specific epithet, for example Puma concolor. However these names change frequently as new information moves a given species into a different genus etc. Most of the time the species concept itself is unchanged. This leads a lot of confusion and difficulty connecting data relating to a given species concept together. This ontology and the related TaxonConcept data set avoids this by minting identifiers that are tied to a specific species concept which can have several names and classifications. The RDF descriptions of each species concept provides some guide as to what is the best species concept for a given specimen or observation, and links together data sets containing additional information about that concept. Since some of these related data sets entail specific names or classifications they are loosely linked using skos:closeMatch etc. Depending on your particular needs, you might want to merge these in your own knowledge base as sameAs or simply merge those properties that you think are appropriate.
comment: Version 0.976 Added additional GenusNameID, SubfamilyNameID and FamilyNameID for NLP project
creator: Peter J DeVries
publisher: TaxonConcept_Knowledge_Base_Project

TaxonConcept_Knowledge_Base_Project
type: Organization
type: Project
type: NamedIndividual
term status: testing

conceptStatus
type: ObjectProperty
comment: The Links to the Status of the TaxonConcept
term status: testing

taxonNameGroupID
type: ObjectProperty
comment: The URI to the Taxon Name Group String
term status: testing

taxonNameGroupID_Of
type: ObjectProperty
inverse of: taxonNameGroupID
term status: testing

taxonNameID
type: ObjectProperty
comment: The URI to the Taxon Name String
term status: testing
range: TaxonNameID

taxonNameID_Of
type: ObjectProperty
comment: The URI to the Taxon Name String
term status: testing
domain: TaxonNameID

acceptedNameID
type: ObjectProperty
comment: The URI to the Accepted Name String, should only be one.
term status: testing
sub property of: taxonNameID
range: TaxonNameID

acceptedTaxonNameID_Of
type: ObjectProperty
term status: testing
sub property of: taxonNameID_Of
inverse of: acceptedNameID
domain: TaxonNameID

originalNameID
type: ObjectProperty
comment: The URI to the Original Name String
term status: testing
sub property of: taxonNameID
range: TaxonNameID

originalNameID_Of
type: ObjectProperty
term status: testing
sub property of: taxonNameID_Of
inverse of: originalNameID
domain: TaxonNameID

altAcceptedNameID
type: ObjectProperty
comment: The URI to an Alternative Accepted Name String
term status: testing
sub property of: taxonNameID
range: TaxonNameID

altAcceptedNameID_Of
type: ObjectProperty
comment: The URI to an Alternative Accepted Name String
term status: testing
sub property of: taxonNameID_Of
inverse of: originalNameID
domain: TaxonNameID

relatedTaxonNameID
type: ObjectProperty
comment: The URI to the Taxon Name String
term status: testing
domain: TaxonNameID
range: TaxonNameID

canonicalFormID
type: ObjectProperty
comment: The URI ID for the canonical form of the name i.e. Puma concolor or Felidae, for name to name mapping
domain: TaxonNameID
range: TaxonNameID
sub property of: relatedTaxonNameID

canonicalFormID Of
type: ObjectProperty
comment: The URI ID for the scientific name with authorship form of the name i.e. Puma concolor Linnaeus 1758, for name to name mapping
domain: TaxonNameID
range: TaxonNameID
sub property of: relatedTaxonNameID

synonymID
type: ObjectProperty
comment: The URI to a synonymID of the TaxonNameID
sub property of: relatedTaxonNameID
range: TaxonNameID
term status: testing

heterochresonymID
type: ObjectProperty
comment: The URI to the Heterochresonym Name String
sub property of: synonymID
range: TaxonNameID
term status: testing

heterotypicNameID
type: ObjectProperty
comment: The URI to the HeterotypicName Name String
sub property of: synonymID
range: TaxonNameID
term status: testing

homotypicNameID
type: ObjectProperty
comment: The URI to the HomotypicName Name String
sub property of: synonymID
range: TaxonNameID
term status: testing

orthochresonymID
type: ObjectProperty
comment: The URI to the Orthochresonym Name String
sub property of: synonymID
range: TaxonNameID
term status: testing

areaHasIndividual
type: ObjectProperty
comment: Links an Area to an Individual
term status: testing

areaHasObservedSpeciesConcept
type: ObjectProperty
comment: Links an Area to a Species Concept
term status: testing

areaHasOccurrence
type: ObjectProperty
comment: Links an Area to an Occurrence
term status: testing

areaInCounty
type: ObjectProperty
comment: Links an Area to Geonames County URI
term status: testing

areaInStateProvince
type: ObjectProperty
comment: Links an Area to Geonames State/Province URI
term status: testing

basisOfRecord
type: ObjectProperty
comment: Assumed to be equivalent to TDWG Basis of Record
term status: testing

georeferenceProtocol
type: ObjectProperty
comment: The method used to determine the latitude, longitude as a URI
term status: testing

georeferenceVerificationStatus
type: ObjectProperty
comment: Was this location verified, controlled choices URI
term status: testing

hasExpectationOf
type: ObjectProperty
comment: This is to link between a geographical area and a taxon-like entity. The doman and range are left blank so this can be used with different kinds of geographic vocabularies and different kinds of taxon concept vocabularies. It should not be used to indicate that a location has the expectation of a specific individual specimen, but to indicate that the location has an expectation of a specific class of organisms. For instance, it would be used to indicate that a geographic location has an expectation of a particular species. The use should approximate assertions similar to what one might find in a state or country checklist.
term status: testing

hasUnknownExpectationOf
type: ObjectProperty
comment: This is to link between a geographical area and a taxon-like entity. Where the association is not known. The doman and range are left blank so this can be used with different kinds of geographic vocabularies and different kinds of taxon concept vocabularies. It should not be used to indicate that a location has the expectation of a specific individual specimen, but to indicate that the location has an expectation of a specific class of organisms. For instance, it would be used to indicate that a geographic location has an expectation of a particular species. The use should approximate assertions similar to what one might find in a state or country checklist.
term status: testing
inverse of: isUnknownAboutIn

isExpectedIn
type: ObjectProperty
comment: This is to link between a taxon-like entity and a geographical area. The doman and range are left blank so this can be used with different kinds of geographic vocabularies and different kinds of taxon concept vocabularies. It should not be used to indicate that a particular individual organism is expecten in a geographical area, but to indicate that the species etc. is expected in a particular geographical area. For instance, it would be used to indicate that a species is expected in a particular state or province. The use should approximate assertions similar to what one might find in a state or country checklist.
term status: testing
inverse of: hasExpectationOf

isUnknownAboutIn
type: ObjectProperty
comment: Links a species concept to a Geonames URI where the relationship is unknown
term status: testing

habitat
type: ObjectProperty
comment: associates a taxon with a habitat in which it may typically be found
equivalent property: habitat
term status: testing

hasCollector
type: ObjectProperty
comment: The occurrence observer or specimen collector, hasCollector?
domain: Occurrence
range: Person
term status: testing

hasCitation
type: ObjectProperty
comment: The range is a uniprot pubmed uri for example http://purl.uniprot.org/pubmed/1083304
term status: testing
range: Citation
sub property of: page

hasADWPage
type: ObjectProperty
comment: The range is a page on the Animal Diversity Web site.
term status: testing
range: Webpage
sub property of: page

hasDiscoverLifePage
type: ObjectProperty
comment: The range is a page on the Discover Life Web site.
term status: testing
range: Webpage
sub property of: page
comment: The range is a page on the http://www.discoverlife.org/ site.

hasDLPage
type: ObjectProperty
comment: The range is a page on the DiscoverLife.org site.
term status: testing
range: Webpage
sub property of: page

hasBBCPage
type: ObjectProperty
comment: The range is a page on the BBC site.
term status: testing
range: Webpage
sub property of: page

hasBOLDPage
type: ObjectProperty
comment: A page at boldsystems.org
term status: testing
range: Webpage
sub property of: page

hasITISPage
type: ObjectProperty
comment: The range is a page on the ITIS.gov site.
term status: testing
range: Webpage
sub property of: page

hasBioimagesPage
type: ObjectProperty
comment: The range is a page on the Bioimages site.
term status: testing
range: Webpage
sub property of: page

isBioimagesPageOf
type: ObjectProperty
term status: testing
inverse of: hasBioimagesPage
domain: Webpage

hasBugGuidePage
type: ObjectProperty
term status: testing
range: Webpage
sub property of: page

isBugGuidePageOf
type: ObjectProperty
term status: testing
inverse of: hasBugGuidePage
domain: Webpage

hasEOLPage
type: ObjectProperty
comment: The range is a page on the Encyclopedia of Life site.
term status: testing
range: Webpage
sub property of: page

isEOLPageOf
type: ObjectProperty
comment: The range is a page on the Encyclopedia of Life site.
term status: testing
domain: Webpage

hasEUNISPage
type: ObjectProperty
term status: testing
range: Webpage
sub property of: page

hasEtypePage
type: ObjectProperty
term status: testing
range: Webpage
sub property of: page

hasGBIFPage
type: ObjectProperty
comment: A page at GBIF.org
term status: testing
range: Webpage
sub property of: page

hasWikispeciesArticle
type: ObjectProperty
term status: testing
range: Webpage
sub property of: page

isWikispeciesArticleOf
type: ObjectProperty
term status: testing
inverse of: hasWikispeciesArticle
domain: Webpage

hasWikipediaArticle
type: ObjectProperty
term status: testing
range: Webpage
sub property of: page

isWikipediaArticleOf
type: ObjectProperty
term status: testing
inverse of: hasWikipediaArticle
domain: Webpage

hasWildObsPage
type: ObjectProperty
term status: testing
range: Webpage
sub property of: page

hasUSDAPlantsPage
type: ObjectProperty
term status: testing
range: Webpage
sub property of: page

hasImage
type: ObjectProperty
comment: Superproperty of all the links to images
term status: testing
equivalent property: depiction

hasMapImage
type: ObjectProperty
sub property of: depiction
range: MapImage
term status: testing

hasGBIFmap
type: ObjectProperty
term status: testing
range: MapImage
sub property of: hasMapImage

hasWikipediaMap
type: ObjectProperty
term status: testing
range: MapImage
sub property of: hasMapImage

identificationHasLabelImage
type: ObjectProperty
comment: The image of the identification label on a specimen
term status: testing
domain: Identification
range: Image
sub property of: hasImage

identificationHasOcccurrence
type: ObjectProperty
comment: The link between an Identification and an Occurrence
domain: Identification
term status: testing

identificationHasSpeciesConcept
type: ObjectProperty
comment: The link between an Identification and Species Concept, redundant with identifiedAs
term status: testing

identificationMethod
type: ObjectProperty
comment: Method used to identify the individual, as a URI
domain: Identification
term status: testing

identificationOfIndividual
type: ObjectProperty
comment: Links an identification to an individual
domain: Identification
term status: testing

identificationReference
type: ObjectProperty
comment: Links an identification to the URI for the reference used.
term status: testing

identifiedBy
type: ObjectProperty
comment: Links an identification to the URI a human that made the identification as URI
domain: Identification
range: Person
term status: testing

inCoLKingdom
type: ObjectProperty
comment: Links a species concept to a Catalog of Life Kingdom in an ontology
term status: testing

inCoLPhylum
type: ObjectProperty
comment: Links a species concept to a Catalog of Life Phylum in an ontology
term status: testing

inCoLClass
type: ObjectProperty
comment: Links a species concept to a Catalog of Life Class in an ontology
term status: testing

inCoLFamily
type: ObjectProperty
comment: Links a species concept to a Catalog of Life Family in an ontology
term status: testing

inCoLOrder
type: ObjectProperty
comment: Links a species concept to a Catalog of Life Order in an ontology
term status: testing

inDBpediaClade
type: ObjectProperty
comment: Links a species concept to a clade in the DBpedia ontology
term status: testing

inKingdom
type: ObjectProperty
term status: testing

inPhylum
type: ObjectProperty
term status: testing

inClass
type: ObjectProperty
term status: testing

inSubclass
type: ObjectProperty
term status: testing

inInfraclass
type: ObjectProperty
term status: testing

inSuperorder
type: ObjectProperty
term status: testing

inOrder
type: ObjectProperty
term status: testing

inSuborder
type: ObjectProperty
term status: testing

inSuperfamily
type: ObjectProperty
term status: testing

inFamily
type: ObjectProperty
term status: testing

inSubfamily
type: ObjectProperty
term status: testing

inGenus
type: ObjectProperty
term status: testing

uniprotKingdom
type: ObjectProperty
range: Taxon

uniprotPhylum
type: ObjectProperty
range: Taxon

uniprotClass
type: ObjectProperty
range: Taxon

uniprotOrder
type: ObjectProperty
range: Taxon

uniprotFamily
type: ObjectProperty
range: Taxon

uniprotGenus
type: ObjectProperty
range: Taxon

uniprotSpecies
type: ObjectProperty
range: Taxon

NCBI Genus
type: ObjectProperty
comment: Links to the most appropriate NCBI Genus
term status: testing

NCBI Species
type: ObjectProperty
comment: Links to the most appropriate NCBI Species
term status: testing

individualHasCurrrentIdentificationAssertion
type: ObjectProperty
comment: Links an individual to the most appropriate identification. Should be one.
domain: SpeciesIndividual
term status: testing

individualHasObservedArea
type: ObjectProperty
comment: Links an individual to an Area
domain: SpeciesIndividual
range: Area
term status: testing

individualHasOccurrence
type: ObjectProperty
comment: Links an individual to an Occurrence, correct
domain: SpeciesIndividual
term status: testing

individualHasPreviousIdentificationAssertion
type: ObjectProperty
comment: Links an individual to the most appropriate identification. Zero to many
domain: SpeciesIndividual
term status: testing

individualHasSpeciesConcept
type: ObjectProperty
comment: Links an individual a Species Concept
domain: SpeciesIndividual
term status: testing

individualStatus
type: ObjectProperty
comment: Links from an individual to a controlled vocabulary of URI's for the current status of that individual
domain: SpeciesIndividual
term status: testing

individualhasImage
type: ObjectProperty
comment: Intended to link an individual to a image. Should be subproperty of foaf:depiction
domain: SpeciesIndividual
term status: testing
sub property of: hasImage

occurrenceHasArea
type: ObjectProperty
comment: Links an occurrence to an area
domain: Occurrence
range: Area
term status: testing

occurrenceHasIndividual
type: ObjectProperty
comment: Links an occurrence to an individual
domain: Occurrence
term status: testing

occurrenceHasLabelImage
type: ObjectProperty
comment: The image of the occurrence label on a specimen
term status: testing
range: Image
domain: Occurrence
sub property of: hasImage

occurrenceHasSpeciesConcept
type: ObjectProperty
comment: Links an occurrence to a species concept
term status: testing
domain: Occurrence
range: SpeciesConcept

occurrenceInContinent
type: ObjectProperty
comment: Links an Occurrence to Geonames Continent URI
term status: testing
domain: Occurrence
range: Feature

occurrenceInCounty
type: ObjectProperty
comment: Links an Occurrence to Geonames County URI
term status: testing
domain: Occurrence
range: Feature

occurrenceInFeature
type: ObjectProperty
term status: testing
domain: Occurrence
range: Feature

occurrenceInStateProvince
type: ObjectProperty
comment: Links an Occurrence to Geonames StateProvince URI
term status: testing
domain: Occurrence
range: Feature

samplingProtocol
type: ObjectProperty
comment: Links an Occurrence to a standard vocabulary of sampling protocols as URI's
domain: Occurrence
term status: testing

sodHasTypeSpecimen
type: ObjectProperty
comment: Links an original description to a species type specimen
term status: testing
inverse of: typeSpecimenHasSod

speciesConceptBasedOn
type: ObjectProperty
comment: This describes the theoretical models behind the species concept. All species concepts are at least based on an Objective Model. In addition the may also be based on a Biological Species Model and or a Phylogenetic Species Model. A species concept could be based on all three of these. This is to reflect that there are several criteria used to support a species concept. It also allows one to create a species concept for the domestic cat that is separate from its wild relative. If one followed a strict phylogentic species model, than the domestic cat would be considered to be a subclass of the species Felis sylvestris. This would result in observations or references about the domestic cat being interpreted as observations or references of the African Wildcat Felis sylvestris.
domain: SpeciesConcept
term status: testing

speciesConceptHasObservedArea
type: ObjectProperty
comment: Links a species to an area. Should be speciesConcept?
term status: testing
domain: SpeciesConcept
range: Area

speciesConceptHasOcccurrence
type: ObjectProperty
comment: Links a species to an occurrence. Should be speciesConcept?
term status: testing
domain: SpeciesConcept

speciesConcepthasVaritypeSpecimen
type: ObjectProperty
comment: Links a species concept to a varitype specimen
term status: testing
inverse of: varitypeSpecimenHasSpeciesConcept

thumbnail
type: ObjectProperty
term status: testing
range: Image
sub property of: depiction

thumbnailOf
type: ObjectProperty
term status: testing
domain: Image
sub property of: depicts

typeSpecimenHasSod
type: ObjectProperty
comment: Links specimen to an original species description
term status: testing

varitypeSpecimenHasSpeciesConcept
type: ObjectProperty
comment: Links a varitype specimen to a species concept
term status: testing

areaWithInFeature
type: ObjectProperty
comment: This is used to connect geo areas to geoname features
term status: testing
sub property of: partOf
domain: Area
range: Feature

featureContainsArea
type: ObjectProperty
comment: This is used to link a geonames feature to a geo area. For example geo:44.86528100,-87.23147800;u=10
term status: testing
sub property of: hasPart
inverse of: areaWithInFeature
domain: Feature
range: Area

descYear
type: ObjectProperty
comment: This is the year of the description
term status: testing
range: Year

descYearOf
type: ObjectProperty
term status: testing
inverse of: descYear
domain: Year

yearBorn
type: ObjectProperty
term status: testing
domain: Person
range: Year

yearDied
type: ObjectProperty
term status: testing
domain: Person
range: Year

yearPub
type: ObjectProperty
comment: The year that document was pub
term status: testing
domain: Document
range: Year

pubYearOf
type: ObjectProperty
comment: The year that document was pub
term status: testing
domain: Year
range: Document
inverse of: yearPub

nameYear
type: ObjectProperty
comment: The year that a name was published
term status: testing
domain: TaxonNameID
range: Year

nameYear
type: ObjectProperty
comment: Inverse of The year that a name was published
term status: testing
domain: Year
range: TaxonNameID
inverse of: nameYear

firstAuthorID
type: ObjectProperty
comment: The URI to the First Author
term status: testing
domain: TaxonNameID
range: Taxonomist

lastAuthorID
type: ObjectProperty
comment: The URI to the Last Author
term status: testing
domain: TaxonNameID
range: Taxonomist

botany author abbreviation
type: DatatypeProperty
term status: testing
sub property of: nick

zoology author abbreviation
type: DatatypeProperty
term status: testing
sub property of: nick

behavioralNote
type: DatatypeProperty
term status: testing

scientificName
type: DatatypeProperty
term status: testing
sub property of: scientificName

binomial
type: DatatypeProperty
term status: testing
sub property of: binomial

trinomial
type: DatatypeProperty
term status: testing
sub property of: trinomial

scientificNameWithAuthor
type: DatatypeProperty
term status: testing
sub property of: prefLabel

hasOriginalName
type: DatatypeProperty
term status: deprecated
sub property of: altLabel

originalName
type: DatatypeProperty
term status: testing
sub property of: altLabel

commonName
type: DatatypeProperty
term status: testing
sub property of: commonName

acceptedName
type: DatatypeProperty
term status: testing
sub property of: prefLabel

hasAcceptedName
type: DatatypeProperty
term status: deprecated
sub property of: prefLabel

synonymName
type: DatatypeProperty
term status: testing
sub property of: hiddenLabel

surrogateName
type: DatatypeProperty
term status: testing
sub property of: altLabel

scientificNameAuthorship
type: DatatypeProperty
comment: The author and year of the species description publication i.e (Baker, 1899)
term status: testing
equivalent property: authority

authority
type: DatatypeProperty
comment: The author and year of the species description publication i.e (Baker, 1899)
term status: testing
equivalent property: authority

hasSpeciesConceptID
type: DatatypeProperty
comment: This is for a string urn type identifier
term status: testing
domain: SpeciesConcept

continent
type: DatatypeProperty
term status: testing

country
type: DatatypeProperty
term status: testing

countryCode
type: DatatypeProperty
term status: testing

county
type: DatatypeProperty
term status: testing

startDate
type: DatatypeProperty
term status: testing

endDate
type: DatatypeProperty
term status: testing

catalogCode
type: DatatypeProperty
term status: testing

collectionCode
type: DatatypeProperty
term status: testing

hasBOLD
type: DatatypeProperty
comment: The Barcode of Life Integer ID
term status: testing

hasEOL
type: DatatypeProperty
comment: The Encyclopedia of Life Integer ID
term status: testing

hasEbird
type: DatatypeProperty
comment: eBird Species Code
term status: testing

hasGBIF
type: DatatypeProperty
comment: The Global Biodiversity Information Facility integer ID
term status: testing

hasITIS
type: DatatypeProperty
comment: The ITIS ID
term status: testing

hasNCBI
type: DatatypeProperty
comment: The NCBI Taxonomy ID
term status: testing

hybrid
type: DatatypeProperty
term status: testing

identificationDate
type: DatatypeProperty
term status: testing

identificationNote
type: DatatypeProperty
term status: testing

institutionCode
type: DatatypeProperty
term status: testing

localityText
type: DatatypeProperty
term status: testing

locationName
type: DatatypeProperty
term status: testing

kingdom
type: DatatypeProperty
term status: testing
sub property of: scientificName

phylum
type: DatatypeProperty
term status: testing
sub property of: scientificName

class
type: DatatypeProperty
term status: testing
equivalent property: class
sub property of: scientificName

order
type: DatatypeProperty
term status: testing
equivalent property: order
sub property of: scientificName

family
type: DatatypeProperty
term status: testing
sub property of: scientificName

genus
type: DatatypeProperty
term status: testing
sub property of: scientificName

Specific epithet
type: DatatypeProperty
term status: testing
sub property of: scientificName

infraspecificEpithet
type: DatatypeProperty
term status: testing
sub property of: scientificName

stateProvince
type: DatatypeProperty
term status: testing

taxonRank
type: DatatypeProperty
term status: testing

yearDescribed
type: DatatypeProperty
comment: The year that the species was originally described
term status: testing

radius
type: DatatypeProperty
comment: The radius in meters from a particular latitude, longitude point from within which a thing was observed or collected.
domain: Area

Area
type: Class
term status: testing
subclass of: SpatialThing

Scientist
type: Class
comment: Class for Scientist a foaf:Person
term status: testing
equivalent class: Scientist
subclass of: Person

Taxonomist
type: Class
comment: Class for a Taxonomist a subclass of dbpedia-owl:Scientist
term status: testing
subclass of: Scientist

ScientificAuthorPerson
type: Class
comment: Someone who has authored a scientific article.
term status: testing
subclass of: Scientist

ScientificCollectorPerson
type: Class
comment: Someone who has collected a scientific sample or specimen.
term status: testing
subclass of: Scientist

ScientificDataCuratorPerson
type: Class
comment: Someone who has curated or entered data into a scientific data set.
term status: testing
subclass of: Scientist

ScientificIdentifierPerson
type: Class
comment: Someone who has identified a specimen.
term status: testing
subclass of: Scientist

DataObject
type: Class
subclass of: DataObject

Year
type: Class
comment: Class for the Concept Year
term status: testing
subclass of: DateTimeDescription

Gallery
type: Class
term status: testing

Identification
type: Class
subclass of: Event
comment: An identification action. The identification of a specimen.
term status: testing

Image
type: Class
equivalent class: Image
term status: testing

MapImage
type: Class
subclass of: Image
term status: testing

Occurrence
type: Class
subclass of: Event
term status: testing

OccurrenceSpecimenTag
type: Class
term status: testing

OccurrenceTaxonTag
type: Class
term status: testing

OpenCycTaxon
type: Class
term status: testing

Sex
type: Class
term status: testing

SpeciesConcept
type: Class
subclass of: TaxonConcept
term status: testing

SpeciesImageTag
type: Class
comment: A tag like entity that can be used to indicate that an image is associated with a specific species concept. Instances of SpeciesImageTag take the form of the species concept URI with the fragment of #Image rather than #Species.
term status: testing

SpeciesIndividual
type: Class
term status: testing

SpeciesIndividualTag
type: Class
comment: A tag like entity that can be used to indicate that an individual organism is an associated with a particular species concept. Instances of SpeciesIndividualTag take the form of the species concept URI with the fragment of #Individual rather than #Species.

SpeciesModel
type: Class
term status: testing

SpeciesOriginalDescription
type: Class
term status: testing

SpeciesTaxonomyNCBI
type: Class
comment: A tag like entity for the NCBI Taxonomic Classification.
term status: testing

Specimen
type: Class
comment: A organismal specimen that is related to a specific organism, parts of an individual organism, or a collection of these from several organisms. It should be used for the smallest entity in a specimen database. Ideally there should be at least one specimen per individual organism. Specimens consisting of multiple individuals or multiple species often complicate analysis. If one photo contains multiple entities, document these as separate specimens all linked to the same photo.
term status: testing

TaxonConcept
type: Class
comment: A particular taxonomic concept. Currently only species concepts are implemented, however theoretically there could be additional subclasses of GenusConcepts, FamilyConcepts etc. A SubspeciesConcept and lower are considered to be subclasses of SpeciesConcepts, but one persons subspecies is often anothers species. My current thinking is to represent individuals and observations of subspecies as individuals and observations of the larger species concept. It has yet to be implemented but I am considering recording these as observations and individuals of a given species "in the form of" their subspecies indentifier or name.
term status: testing

TaxonNameID
type: Class
subclass of: TaxonNameID

SurrogateNameID
type: Class
subclass of: TaxonNameID
term status: testing

ScientificNameID
type: Class
subclass of: TaxonNameID
term status: testing

MonomialNameID
type: Class
subclass of: ScientificNameID
term status: testing

GenusNameID
type: Class
subclass of: MonomialNameID
term status: testing

SubfamilyNameID
type: Class
subclass of: MonomialNameID
term status: testing

FamilyNameID
type: Class
subclass of: MonomialNameID
term status: testing

BinomialNameID
type: Class
subclass of: ScientificNameID
term status: testing

TrinomialNameID
type: Class
subclass of: ScientificNameID
term status: testing

ScientificNameWithAuthorID
type: Class
subclass of: TaxonNameID
term status: testing

CommonNameID
type: Class
subclass of: TaxonNameID
term status: testing

TaxonNameGroupID
type: Class
term status: testing

TaxonOntology
type: Class
term status: testing

TaxonRank
type: Class
term status: testing

female
type: Class
type: Sex
type: NamedIndividual
description: Female (♀) is the sex of an organism, or a part of an organism, which produces mobile ova (egg cells).
term status: testing

hermaphrodite
type: Class
type: Sex
type: NamedIndividual
description: one organism having both male and female sexual characteristics and organs; at birth an unambiguous assignment of male or female cannot be made
term status: testing

male
type: Class
type: Sex
type: NamedIndividual
description: Male (♂) refers to the sex of an organism, or part of an organism, which produces small mobile gametes, called spermatozoa.
term status: testing

Sex Undetermined
type: Class
type: Sex
type: NamedIndividual
term status: testing

Sex Unknowable
type: Class
type: Sex
type: NamedIndividual
term status: testing

TDWG2010 BioBlitz Project
type: Project
type: NamedIndividual
term status: testing

Rank Domain
type: Class
type: NamedIndividual
type: TaxonRank
narrower: Rank Subdomain
term status: testing

Rank Subdomain
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Domain
narrower: Rank Superkingdom
term status: testing

Rank Superkingdom
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Subdomain
narrower: Rank Kingdom
term status: testing

Rank Kingdom
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Superkingdom
narrower: Rank Subkingdom
term status: testing

Rank Subkingdom
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Kingdom
narrower: Rank Infrakingdom
term status: testing

Rank Infrakingdom
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Subkingdom
narrower: Rank Superphylum
term status: testing

Rank Superphylum
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Infrakingdom
narrower: Rank Phylum
term status: testing

Rank Superdivision
type: Class
type: NamedIndividual
type: TaxonRank
term status: testing

Rank Phylum
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Superphylum
narrower: Rank Subphylum
term status: testing

Rank Division
type: Class
type: NamedIndividual
type: TaxonRank
term status: testing

Rank Subphylum
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Phylum
narrower: Rank Superclass
term status: testing

Rank Subdivision
type: Class
type: NamedIndividual
type: TaxonRank
term status: testing

Rank Superclass
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Subphylum
narrower: Rank Class
term status: testing

Rank Class
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Superclass
narrower: Rank Subclass
term status: testing

Rank Subclass
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Class
narrower: Rank Infraclass
term status: testing

Rank Infraclass
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Subclass
narrower: Rank Superorder
term status: testing

Rank Superorder
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Infraclass
narrower: Rank Order
term status: testing

Rank Order
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Superorder
narrower: Rank Suborder
term status: testing

Rank Suborder
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Order
narrower: Rank Infraorder
term status: testing

Rank Infraorder
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Suborder
narrower: Rank Parvorder
term status: testing

Rank Parvorder
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Infraorder
narrower: Rank Superfamily
term status: testing

Rank Superfamily
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Parvorder
narrower: Rank Family
term status: testing

Rank Family
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Superfamily
narrower: Rank Subfamily
term status: testing

Rank Subfamily
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Family
narrower: Rank Tribe
term status: testing

Rank Tribe
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Subfamily
narrower: Rank Genus
term status: testing

Rank Genus
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Tribe
narrower: Rank Subgenus
term status: testing

Rank Subgenus
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Genus
narrower: Rank Species
term status: testing

Rank Species
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Subgenus
narrower: Rank Subpecies
term status: testing

Rank Subpecies
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Species
term status: testing

Rank SubspecificAggregate
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Species
term status: testing

Rank Variety
type: Class
type: NamedIndividual
type: TaxonRank
broader: Rank Species
term status: testing

Habitat
type: Class
equivalent class: Habitat
term status: testing

TerrestrialHabitat
type: Class
subclass of: Habitat
equivalent class: TerrestrialHabitat
term status: testing

FreshwaterHabitat
type: Class
subclass of: Habitat
equivalent class: FreshwaterHabitat
term status: testing

FreshwaterHabitat
type: Class
subclass of: Habitat
equivalent class: MarineHabitat
term status: testing

TaxonConcept_Scheme
type: Concept
type: NamedIndividual
term status: testing

Status_Testing
type: Concept
type: NamedIndividual
term status: testing

Status_Preliminary
type: Concept
type: NamedIndividual
term status: testing