@prefix dce: . @prefix owl: . @prefix rdfs: . @prefix skos: . @prefix xsd: . @prefix quant: . @prefix event: . @prefix agent: . @prefix humanbody: . @prefix clisko: . @prefix heca: . @prefix clinobs: . a owl:Ontology; dce:title """Clinical Observation"""@en; dce:creator """Hans Cools, MD; Agfa Healthcare/Belgium"""@en; dce:contributor """Until 2010: Pieterjan De Potter; Ghent University - IBBT/ELIS - Multimedia Lab/Belgium"""@en; dce:publisher """Agfa Healthcare/Belgium"""@en; dce:description """Formal description of general clinical findings, observables, and their relations."""@en; dce:format """OWL Full"""@en; rdfs:comment """Copyright (c) 2009 Agfa-Gevaert Group / Ghent University - IBBT/ELIS - Multimedia Lab All Rights Reserved THIS IS UNPUBLISHED PROPRIETARY SOURCE CODE OF Agfa-Gevaert Group/ Ghent University - IBBT/ELIS - Multimedia Lab The copyright notice above does not evidence any actual or intended publication of such source code."""@en; skos:note """For vital signs see: http://www.agfa.com/w3c/2009/bloodPressure#BloodPressure http://www.agfa.com/w3c/2009/bodyTemperature#BodyTemperature http://www.agfa.com/w3c/2009/pulseRate#PulseRate http://www.agfa.com/w3c/2009/respiratoryRate#RespiratoryRate."""@en. # # CLASSES # clinobs:Finding a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """clinical finding"""@en; skos:definition """A manifestation of a patient's health state, e.g. fever."""@en; skos:note """Abstracted whether found by patient (often referred to as symptom), health care professional (sign) or someone else."""@en; rdfs:subClassOf event:Finding; #, [ #a owl:Restriction; owl:onProperty agent:hasPlayedRole; owl:someValuesFrom heca:Patient]; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "404684003"^^clisko:sct20080731DT]. clinobs:GeneralFinding a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """general clinical finding"""@en; skos:definition """A manifestation of a patient's health state involving the whole body."""@en; rdfs:subClassOf clinobs:Finding. clinobs:Observable a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """clinical observable"""@en; skos:definition """Something that can be observed in a patient, e.g. body temperature."""@en; rdfs:subClassOf event:Observable; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "363787002"^^clisko:sct20080731DT]. # clinobs:PatientState clinobs:VitalSign a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """vital sign"""@en; skos:definition """Sign of life, indicator of a person's general physical condition, to assess the most basic body functions."""@en; rdfs:subClassOf clinobs:Observable; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "46680005"^^clisko:sct20080731DT]. clinobs:CardiacRate a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """cardiac rate"""@en; skos:definition """Rate of human cardiac pumping as heart beats per unit of time."""@en; rdfs:subClassOf quant:Frequency; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "258983007"^^clisko:sct20080731DT]. clinobs:Pain a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """pain"""@en; skos:definition """Sensory experience as the unpleasant awareness of a noxious stimulus"""@en; rdfs:subClassOf clinobs:Finding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "22253000"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "A01"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R52.9"^^clisko:icd10DT]. clinobs:RadiatingPain a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """radiating pain"""@en; rdfs:subClassOf clinobs:Pain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "301369003"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "L99"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "M54.1"^^clisko:icd10DT]. clinobs:Headache a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """headache"""@en; rdfs:subClassOf clinobs:Pain; rdfs:subClassOf [ a owl:Restriction; owl:onProperty clinobs:hasSite; owl:minCardinality """1"""^^xsd:nonNegativeInteger]; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "25064002"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "N01"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R51"^^clisko:icd10DT]. clinobs:NeckPain a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """neck pain"""@en; rdfs:subClassOf clinobs:Pain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "81680005"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "L01"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "M54.2"^^clisko:icd10DT]. clinobs:PainInHeadAndNeckRegion a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """pain of head and neck region"""@en; rdfs:subClassOf clinobs:Pain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "301365009"^^clisko:sct20080731DT]. clinobs:ChestPain a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """chest pain"""@en; rdfs:subClassOf clinobs:Pain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "29857009"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "A11"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R07.4"^^clisko:icd10DT]. clinobs:LeftSidedChestPain a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """left sided chest pain"""@en; rdfs:subClassOf clinobs:ChestPain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "285385002"^^clisko:sct20080731DT]. clinobs:PainRadiatingToLeftArm a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """pain radiating to left arm"""@en; rdfs:subClassOf clinobs:RadiatingPain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "425677008"^^clisko:sct20080731DT]. clinobs:PainRadiatingToCentreOfChest a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """pain radiating to centre of chest"""@en; rdfs:subClassOf clinobs:RadiatingPain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "427365005"^^clisko:sct20080731DT]. clinobs:PainRadiatingToHead a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """pain radiating to head"""@en; rdfs:subClassOf clinobs:RadiatingPain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "425839000"^^clisko:sct20080731DT]. clinobs:PainRadiatingToJaw a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """pain radiating to jaw"""@en; rdfs:subClassOf clinobs:RadiatingPain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "426555006"^^clisko:sct20080731DT]. clinobs:PainRadiatingToLeftSideOfChest a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """pain radiating to left side of chest"""@en; rdfs:subClassOf clinobs:RadiatingPain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "427293006"^^clisko:sct20080731DT]. clinobs:PainRadiatingToUpperAbdomen a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """pain radiating to upper abdomen"""@en; rdfs:subClassOf clinobs:RadiatingPain; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "427075000"^^clisko:sct20080731DT]. # SuprapubicPain # FlankPain # CostovertebranAngleTenderness clinobs:Stiffness a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """stiffness"""@en; rdfs:subClassOf clinobs:Finding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "271587009"^^clisko:sct20080731DT]. clinobs:NeckStiffness a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """neck stiffness"""@en; rdfs:subClassOf clinobs:Stiffness; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "161882006"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "L01"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "M54.2"^^clisko:icd10DT]. clinobs:Syncope a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """syncope"""@en; skos:definition """Brief loss of consciousness caused by transient cerebral ischemia"""@en; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "271594007"^^clisko:sct20080731DT]. clinobs:Dyspnoea a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """dyspnoea"""@en; rdfs:subClassOf clinobs:Finding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "267036007"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "R02"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R06.0"^^clisko:icd10DT]. clinobs:DyspnoeaAtRest a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """dyspnoea at rest"""@en; rdfs:subClassOf clinobs:Dyspnoea; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "161941007"^^clisko:sct20080731DT]. clinobs:DyspnoeaOnExertion a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """dyspnoea on exertion"""@en; rdfs:subClassOf clinobs:Dyspnoea; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "60845006"^^clisko:sct20080731DT]. clinobs:Tachypnoea a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """tachypnoea"""@en; skos:definition """Increased respiration rate, rapid breathing."""@en; rdfs:subClassOf clinobs:Finding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "271823003"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "R02"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R06.0"^^clisko:icd10DT]. clinobs:Fatigue a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """fatigue"""@en; rdfs:subClassOf clinobs:GeneralFinding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "84229001"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "A04"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R53"^^clisko:icd10DT]. clinobs:WeightLoss a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """weight loss"""@en; skos:definition """"Reduction of total body mass, due to a loss of fluid, body fat or adipose tissue and/or lean mass, namely bone mineral deposits, muscle, tendon and other connective tissue."""@en; rdfs:subClassOf clinobs:GeneralFinding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "267024001"^^clisko:sct20080731DT]. # "267024001"^^clisko:sct20080731DT, abnormal weight loss # "309257005"^^clisko:sct20080731DT, excessive weight loss clinobs:Fever a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """fever"""@en; skos:definition """Increase in internal body temperature above normal due to temporary elevation in the body's thermoregulatory set-point."""@en; rdfs:subClassOf clinobs:GeneralFinding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "386661006"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "A03"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R50.9"^^clisko:icd10DT]. clinobs:SleepHyperhidrosis a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """sleep hyperhidrosis"""@en; rdfs:subClassOf clinobs:GeneralFinding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "42984000"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R61.9"^^clisko:icd10DT]. clinobs:SwollenAnkle a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """swollen ankle"""@en; rdfs:subClassOf clinobs:Finding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "267039000"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "L16"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "M25.4"^^clisko:icd10DT]. clinobs:Oedema a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """oedema"""@en; rdfs:subClassOf clinobs:Finding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "267038008"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "K07"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R60.9"^^clisko:icd10DT]. clinobs:AnkleOedema a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """ankle oedema"""@en; rdfs:subClassOf clinobs:Oedema; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "26237000"^^clisko:sct20080731DT]. clinobs:Palpitations a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """palpitations"""@en; rdfs:subClassOf clinobs:Finding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "80313002"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "K04"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R00.2"^^clisko:icd10DT]. clinobs:RespiratoryCrackles a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """respiratory crackles"""@en; rdfs:subClassOf clinobs:Finding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "48409008"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "R29"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R09.8"^^clisko:icd10DT]. # Nausea clinobs:Vomiting a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """vomiting"""@en; rdfs:subClassOf clinobs:Finding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "300359004"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "D10"^^clisko:icpc2DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R11"^^clisko:icd10DT]. clinobs:Rash a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """rash"""@en; skos:definition """Change of skin appearance (e.g. eruption), color, and/or texture."""@en; rdfs:subClassOf clinobs:Finding; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "271807003"^^clisko:sct20080731DT], [ a skos:Concept; skos:inScheme clisko:icd10; skos:notation "R21"^^clisko:icd10DT]. clinobs:LocalizedRash a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """localized rash"""@en; rdfs:subClassOf clinobs:Rash; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "S06"^^clisko:icpc2DT]. clinobs:GeneralizedRash a rdfs:Class; rdfs:isDefinedBy ; rdfs:label """generalized rash"""@en; rdfs:subClassOf clinobs:Rash; skos:exactMatch [ a skos:Concept; skos:inScheme clisko:icpc2; skos:notation "S07"^^clisko:icpc2DT]. # Nasopharyngeal carriage of Neisseria meningitidis # # PROPERTIES # clinobs:hasObservable a owl:ObjectProperty; rdfs:isDefinedBy ; rdfs:label """has clinical observable"""@en; skos:definition """Specifying an observable of a human patient."""@en; rdfs:domain [a owl:Restriction; owl:onProperty agent:playsRole; owl:someValuesFrom heca:Patient]; rdfs:range clinobs:Observable. clinobs:hasSite a owl:ObjectProperty; rdfs:isDefinedBy ; rdfs:label """has clinical finding site"""@en; skos:definition """Specifying a human body site where a manifestation of a patient's health state is found."""@en; rdfs:domain clinobs:Finding; rdfs:range [ rdfs:subClassOf humanbody:Structure, [ skos:exactMatch [ a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "363698007"^^clisko:sct20080731DT]]]. clinobs:hasFinding a owl:ObjectProperty; rdfs:isDefinedBy ; rdfs:label """has clinical finding"""@en; skos:definition """Specifying a finding a human patient has."""@en; rdfs:subPropertyOf agent:actsIn; rdfs:domain [a owl:Restriction; owl:onProperty agent:playsRole; owl:someValuesFrom heca:Patient]; rdfs:range clinobs:Finding. clinobs:findingOf a owl:ObjectProperty; rdfs:isDefinedBy ; rdfs:label """clinical finding of"""@en; skos:definition """Specifying a human patient having a clinical finding."""@en; rdfs:subPropertyOf agent:hasAgent; rdfs:domain clinobs:Finding; rdfs:range [a owl:Restriction; owl:onProperty agent:playsRole; owl:someValuesFrom heca:Patient]. clinobs:isNotFinding a owl:ObjectProperty; rdfs:isDefinedBy ; rdfs:label """is not clinical finding"""@en; skos:definition """Specifying a clinical finding not found in a human patient."""@en; rdfs:domain clinobs:Finding; rdfs:range clinobs:Finding.