@prefix rdfs: . @prefix owl: . @prefix dct: . @prefix xsd: . @prefix : . @prefix orth: . @prefix up: . @prefix obo: . @prefix sio: . a owl:Ontology ; dct:title "An ontology for MBGD" ; dct:description "An ontology for describing MBGD data." ; owl:versionInfo "2014-10-16" ; owl:versionIRI ; owl:priorVersion ; rdfs:seeAlso ; owl:imports , . :CDS a owl:Class ; rdfs:label "CDS" ; rdfs:subClassOf orth:Gene ; rdfs:isDefinedBy . :tRNA a owl:Class ; rdfs:label "tRNA" ; rdfs:subClassOf orth:Gene ; rdfs:isDefinedBy . :rRNA a owl:Class ; rdfs:label "rRNA" ; rdfs:subClassOf orth:Gene ; rdfs:isDefinedBy . :ncRNA a owl:Class ; rdfs:label "ncRNA" ; rdfs:subClassOf orth:Gene ; rdfs:isDefinedBy . :tmRNA a owl:Class ; rdfs:label "tmRNA" ; rdfs:subClassOf orth:Gene ; rdfs:isDefinedBy . :snoRNA a owl:Class ; rdfs:label "snoRNA" ; rdfs:subClassOf orth:Gene ; rdfs:isDefinedBy . :misc_RNA a owl:Class ; rdfs:label "misc_RNA" ; rdfs:subClassOf orth:Gene ; rdfs:isDefinedBy . :Domain a owl:Class ; rdfs:label "Domain" ; rdfs:subClassOf orth:SequenceUnit ; rdfs:isDefinedBy . :NucSeq a owl:Class ; rdfs:label "NucSeq" ; rdfs:subClassOf orth:Resource ; rdfs:isDefinedBy . :Chromosome a owl:Class ; rdfs:label "Chromosome" ; rdfs:subClassOf :NucSeq ; rdfs:subClassOf obo:SO_0000340 ; rdfs:isDefinedBy . :Contig a owl:Class ; rdfs:label "Contig" ; rdfs:subClassOf :NucSeq ; rdfs:isDefinedBy . :Plasmid a owl:Class ; rdfs:label "Plasmid" ; rdfs:subClassOf :NucSeq ; rdfs:subClassOf obo:SO_0000155 ; rdfs:isDefinedBy . :Mitochondrion a owl:Class ; rdfs:label "Mitochondrion" ; rdfs:subClassOf :NucSeq ; rdfs:subClassOf obo:SO_0001032 ; rdfs:isDefinedBy . :NucShape a owl:Class ; rdfs:label "NucShape" ; rdfs:subClassOf orth:Resource ; rdfs:subClassOf obo:SO_0000443 ; rdfs:isDefinedBy . :Linear a owl:Class ; rdfs:label "Linear" ; rdfs:subClassOf :Shape ; owl:equivalentClass obo:SO_0000987 ; rdfs:isDefinedBy . :Circular a owl:Class ; rdfs:label "Circular" ; rdfs:subClassOf :Shape ; owl:equivalentClass obo:SO_0000988 ; rdfs:isDefinedBy . :gtps a owl:ObjectProperty ; rdfs:label "gtps" ; rdfs:subPropertyOf orth:gene ; rdfs:isDefinedBy . :uniprot a owl:ObjectProperty ; rdfs:label "uniprot" ; rdfs:subPropertyOf orth:protein ; rdfs:range up:Protein ; rdfs:isDefinedBy . :domain a owl:ObjectProperty ; rdfs:label "domain" ; rdfs:domain orth:Gene ; rdfs:range :Domain ; rdfs:subPropertyOf orth:crossReference ; rdfs:subPropertyOf dct:hasPart ; rdfs:subPropertyOf obo:so_has_part ; rdfs:subPropertyOf sio:SIO_000974 ; rdfs:isDefinedBy . :nucSeq a owl:ObjectProperty ; rdfs:label "genome" ; rdfs:domain orth:Resource ; rdfs:range :NucSeq ; rdfs:subPropertyOf orth:reference ; rdfs:isDefinedBy . :score a owl:DatatypeProperty ; rdfs:label "score" ; rdfs:domain orth:OrthologGroup ; rdfs:range xsd:decimal ; rdfs:subPropertyOf orth:groupScore ; rdfs:isDefinedBy . :dist a owl:DatatypeProperty ; rdfs:label "dist" ; rdfs:domain orth:OrthologGroup ; rdfs:range xsd:decimal ; rdfs:subPropertyOf orth:groupScore ; rdfs:isDefinedBy . :funcCategory a owl:DatatypeProperty ; rdfs:label "funcCategory" ; rdfs:domain orth:OrthologGroup ; rdfs:range xsd:string ; rdfs:subPropertyOf orth:groupValue ; rdfs:isDefinedBy . :funcMbgd a owl:DatatypeProperty ; rdfs:label "funcMbgd" ; rdfs:domain orth:OrthologGroup ; rdfs:range xsd:string ; rdfs:subPropertyOf :funcCategory ; rdfs:isDefinedBy . :funcCog a owl:DatatypeProperty ; rdfs:label "funcCog" ; rdfs:domain orth:OrthologGroup ; rdfs:range xsd:string ; rdfs:subPropertyOf :funcCategory ; rdfs:isDefinedBy . :funcKegg a owl:DatatypeProperty ; rdfs:label "funcKegg" ; rdfs:domain orth:OrthologGroup ; rdfs:range xsd:string ; rdfs:subPropertyOf :funcCategory ; rdfs:isDefinedBy . :funcTigr a owl:DatatypeProperty ; rdfs:label "funcTigr" ; rdfs:domain orth:OrthologGroup ; rdfs:range xsd:string ; rdfs:subPropertyOf :funcCategory ; rdfs:isDefinedBy . :geneValue a owl:DatatypeProperty ; rdfs:label "geneValue" ; rdfs:domain orth:Gene ; rdfs:range rdfs:Literal ; rdfs:subPropertyOf orth:value ; rdfs:isDefinedBy . :aaLength a owl:DatatypeProperty ; rdfs:label "aaLength" ; rdfs:domain orth:Gene ; rdfs:range xsd:integer ; rdfs:subPropertyOf :geneValue ; rdfs:subPropertyOf sio:SIO_000041 ; rdfs:isDefinedBy . :domainValue a owl:DatatypeProperty ; rdfs:label "domainValue" ; rdfs:domain :Domain ; rdfs:range rdfs:Literal ; rdfs:subPropertyOf orth:value ; rdfs:isDefinedBy . :domainPosition a owl:DatatypeProperty ; rdfs:label "domainPosition" ; rdfs:domain :Domain ; rdfs:range xsd:integer ; rdfs:subPropertyOf :domainValue ; rdfs:subPropertyOf sio:SIO_000789 ; rdfs:isDefinedBy . :domainBegin a owl:DatatypeProperty ; rdfs:label "domainBegin" ; rdfs:domain :Domain ; rdfs:range xsd:integer ; rdfs:subPropertyOf :domainPosition ; rdfs:subPropertyOf sio:SIO_000791 ; rdfs:isDefinedBy . :domainEnd a owl:DatatypeProperty ; rdfs:label "domainEnd" ; rdfs:domain :Domain ; rdfs:range xsd:integer ; rdfs:subPropertyOf :domainPosition ; rdfs:subPropertyOf sio:SIO_000792 ; rdfs:isDefinedBy . :organismValue a owl:DatatypeProperty ; rdfs:label "organismValue" ; rdfs:domain orth:Organism ; rdfs:subPropertyOf orth:value ; rdfs:isDefinedBy . :family a owl:DatatypeProperty ; rdfs:label "family" ; rdfs:domain orth:Organism ; rdfs:range xsd:string ; rdfs:subPropertyOf :organismValue ; rdfs:isDefinedBy . :genus a owl:DatatypeProperty ; rdfs:label "genus" ; rdfs:domain orth:Organism ; rdfs:range xsd:string ; rdfs:subPropertyOf :organismValue ; rdfs:isDefinedBy . :species a owl:DatatypeProperty ; rdfs:label "species" ; rdfs:domain orth:Organism ; rdfs:range xsd:string ; rdfs:subPropertyOf :organismValue ; rdfs:isDefinedBy . :strain a owl:DatatypeProperty ; rdfs:label "strain" ; rdfs:domain orth:Organism ; rdfs:range xsd:string ; rdfs:subPropertyOf :organismValue ; rdfs:isDefinedBy . :nucSeqValue a owl:DatatypeProperty ; rdfs:label "nucSeqValue" ; rdfs:domain :NucSeq ; rdfs:range rdfs:Literal ; rdfs:subPropertyOf orth:value ; rdfs:isDefinedBy . :nucLength a owl:DatatypeProperty ; rdfs:label "nucLength" ; rdfs:domain :NucSeq ; rdfs:range xsd:integer ; rdfs:subPropertyOf :nucSeqValue ; rdfs:subPropertyOf sio:SIO_000041 ; rdfs:isDefinedBy . :geneCount a owl:DatatypeProperty ; rdfs:label "geneCount" ; rdfs:domain :NucSeq ; rdfs:range xsd:integer ; rdfs:subPropertyOf :nucSeqValue ; rdfs:isDefinedBy .